LOINC Home

{component}   LP432695-7

Laboratory   LP29693-6

Microbiology and Antimicrobial susceptibility   LP343406-7

Microbiology   LP7819-8

Microbiology Panels   LP7835-4

Gastrointestinal pathogens DNA and RNA panel   LP217207-2

Gastrointestinal pathogens DNA and RNA panel | Stool | Microbiology Panels   LP379970-9

Gastrointestinal pathogens DNA and RNA panel - Stool by NAA with non-probe detection   82195-9

LOINC Code


LOINC code82195-9
nameGastrointestinal pathogens DNA and RNA panel - Stool by NAA with non-probe detection
descriptionThis panel includes terms used to report the detection of various enteric pathogens in stool using PCR and non-probe-based detection methods, such as melt curve analysis. The targeted pathogens and detection rate may vary across test kits and for a single test kit over time. This panel was originally created for, but is not limited in use to, the FilmArray Gastrointestinal Panel (GI) (v2.1, 2015), which detects and identifies the following bacteria, parasites, and viruses: Campylobacter (C. jejuni/C. coli/C. upsaliensis), Clostridium difficile toxin A/B, Plesiomonas shigelloides, Salmonella, Vibrio (V. parahaemolyticus/V. vulnificus/V. cholerae), including specific identification of Vibrio cholerae, Yersinia enterocolitica, Enteroaggregative Escherichia coli (EAEC), Enteropathogenic Escherichia coli (EPEC), Enterotoxigenic Escherichia coli (ETEC) lt/st, Shiga-like toxin-producing Escherichia coli (STEC) stx1/stx2, Escherichia coli O157, Shigella/Enteroinvasive Escherichia coli (EIEC), Cryptosporidium, Cyclospora cayetanensis, Entamoeba histolytica, Giardia lamblia, Adenovirus F 40/41, Astrovirus, Norovirus GI/GII, Rotavirus A, and Sapovirus (Genogroups I, II, IV, and V).
statusACTIVE

Fully-Specified Name

componentGastrointestinal pathogens DNA & RNA panel
property-
timePt  =  Point in time:  To identify measures at a point in time. This is a synonym for “spot” or “random” as applied to urine measurements.
systemStool  =  Stool = Fecal
scale-
methodNon-probe.amp.tar

Additional Names

short nameGI path DNA+RNA Pnl Stl NAA+non-probe

Basic Attributes

classPANEL.MICRO
type1  Laboratory
order vs. observationOrder

Panel Components

82196-7Campylobacter coli+jejuni+upsaliensis DNA [Presence] in Stool by NAA with non-probe detection
82197-5Clostridioides difficile toxin A+B tcdA+tcdB genes [Presence] in Stool by NAA with non-probe detection
82198-3Plesiomonas shigelloides DNA [Presence] in Stool by NAA with non-probe detection
82199-1Salmonella enterica+bongori DNA [Presence] in Stool by NAA with non-probe detection
82200-7Vibrio cholerae+parahaemolyticus+vulnificus DNA [Presence] in Stool by NAA with non-probe detection
82201-5Vibrio cholerae DNA [Presence] in Stool by NAA with non-probe detection
82202-3Yersinia enterocolitica DNA [Presence] in Stool by NAA with non-probe detection
80348-6Escherichia coli enteropathogenic eae gene [Presence] in Stool by NAA with non-probe detection
80349-4Escherichia coli enteroaggregative pAA plasmid aggR+aatA genes [Presence] in Stool by NAA with non-probe detection
80351-0Escherichia coli enterotoxigenic ltA+st1a+st1b genes [Presence] in Stool by NAA with non-probe detection
82203-1Escherichia coli Stx1 and Stx2 toxin stx1+stx2 genes [Presence] in Stool by NAA with non-probe detection
82204-9Escherichia coli O157 DNA [Presence] in Stool by NAA with non-probe detection
80350-2Shigella species+EIEC invasion plasmid antigen H ipaH gene [Presence] in Stool by NAA with non-probe detection
82205-6Cryptosporidium sp DNA [Presence] in Stool by NAA with non-probe detection
82206-4Cyclospora cayetanensis DNA [Presence] in Stool by NAA with non-probe detection
82207-2Entamoeba histolytica DNA [Presence] in Stool by NAA with non-probe detection
82208-0Giardia lamblia DNA [Presence] in Stool by NAA with non-probe detection
82209-8Adenovirus 40+41 DNA [Presence] in Stool by NAA with non-probe detection
82210-6Astrovirus subtypes 1-8 RNA [Presence] in Stool by NAA with non-probe detection
82211-4Norovirus genogroup I+II RNA [Presence] in Stool by NAA with non-probe detection
82212-2Rotavirus A RNA [Presence] in Stool by NAA with non-probe detection
82213-0Sapovirus genogroups I+II+IV+V RNA [Presence] in Stool by NAA with non-probe detection

Associated Observations

LOINC codes that represent optional associated observation(s) for a clinical observation or laboratory test. A LOINC term may represent a single associated observation or panel containing several associated observations.

History/Usage

test rank10193 of 2000 most commonly performed tests by labs in USA
first released
last updated2.73
last change typeMIN  - change to field other than name

Related Names

3 Self-Sustaining Sequence Replication
3SR SR
Amplif
Amplification
Amplified
Bowel movement
Deoxyribonucleic acid
DNA NUCLEIC ACID PROBE
DNA probe
Faecal
Faeces
Fecal
Feces
Gastro
Gastroenterology
GI
GI path DNA+RNA Pnl
GI pathogens
ID
Infectious Disease
InfectiousDisease
LAT
LCR
Ligase chain reaction
Ligation-activated transcription
 Microbiology
NAA+non-probe
NAA+probe
NAAT
NASBA
Nucleic acid sequence based analysis
Pan
PANEL.MICROBIOLOGY
Panl
PCR
Pnl
Point in time
Polymerase chain reaction
Probe amp
Probe with ampification
Probe with target amplification
QBR
Random
Ribonucleic acid
SDA
Stl
Stool = Fecal
Strand Displacement Amplification
TMA
Transcription mediated amplification

Copyright © 2024 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © 1995-2024, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.

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