Bordetella pertussis and parapertussis and holmesii DNA panel - Specimen by NAA with probe detection   85809-2

LOINC Code


LOINC code85809-2
nameBordetella pertussis and parapertussis and holmesii DNA panel - Specimen by NAA with probe detection
descriptionThis panel contains qualitative results for targeted nucleic acid sequences within Bordetella pertussis, B. parapertussis, and B. holmesii DNA extracted from clinical specimens or culture isolates. This term is based on, but not limited in use to, the submitter's multi-target real-time PCR assay targeting multicopy insertion sequences (IS481, pIS1001, hIS1001) in combination with the pertussis toxin subunit S1 (ptxS1) gene for the identification of B. pertussis, B. parapertussis, and B. holmesii. The presence of IS481 and ptxS1 indicates B. pertussis, pIS1001 and ptxS1 indicates B. parapertussis, IS481 and hIS1001 indicates holmesii.[PMID: 21940464]
statusACTIVE

Fully-Specified Name

componentBordetella pertussis & parapertussis & holmesii DNA panel
property-
timePt  =  Point in time:  To identify measures at a point in time. This is a synonym for “spot” or “random” as applied to urine measurements.
systemXXX
scale-
methodProbe.amp.tar

Additional Names

short nameB per + parap + holm DNA Pnl Spec NAA+pr

Basic Attributes

classPANEL.MICRO
type1  Laboratory
order vs. observationOrder

Panel Components

23826-1Bordetella pertussis DNA [Presence] in Specimen by NAA with probe detection
29723-4Bordetella parapertussis DNA [Presence] in Specimen by NAA with probe detection
62427-0Bordetella holmesii DNA [Presence] in Specimen by NAA with probe detection

Associated Observations

LOINC codes that represent optional associated observation(s) for a clinical observation or laboratory test. A LOINC term may represent a single associated observation or panel containing several associated observations.

History/Usage

first released
last updated2.69
last change typeMIN  - change to field other than name

Related Names

3 Self-Sustaining Sequence Replication
3SR SR
Amplif
Amplification
Amplified
B per + parap + holm DNA Pnl
B pert
B pertussis
Deoxyribonucleic acid
DNA NUCLEIC ACID PROBE
DNA probe
ID
Infectious Disease
InfectiousDisease
LAT
LCR
Ligase chain reaction
Ligation-activated transcription
Microbiology
Misc
Miscellaneous
NAA+probe
NAAT
NASBA
Nucleic acid sequence based analysis
Other
Pan
PANEL.MICROBIOLOGY
Panl
PCR
Pertussis
Pnl
Point in time
Polymerase chain reaction
Probe amp
Probe with ampification
Probe with target amplification
QBR
Random
SDA
Spec
Strand Displacement Amplification
TMA
To be specified in another part of the message
Transcription mediated amplification
Unspecified
Whooping cough

Copyright © 2024 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © 1995-2024, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.

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