Porcine epidemic diarrhea virus whole genome [Nucleotide sequence] in Isolate by Sequencing 86928-9
LOINC Code
| LOINC code | 86928-9 | ||
|---|---|---|---|
| name | Porcine epidemic diarrhea virus whole genome [Nucleotide sequence] in Isolate by Sequencing | ||
| description | Porcine Epidemic Diarrhea Virus (PEDv) is a large-enveloped RNA virus, which is a member of the genus Alphacoronavirus within the Coronaviridae family. The complete PEDv genome consists of 5 gene segments: open reading frame 1 (ORF1), spike (S), envelope (E), membrane (M), and nucleocapsid (N). It is encapsulated by a single N protein. The S protein is the major envelope type I glycoprotein of the virion and contributes to the stimulation of neutralizing antibodies in the infected host. Its association to adapted growth in vitro and attenuation in vivo lends itself to use for genetic comparison among PEDV isolates and effective vaccines. The M protein is required for assembly and can also induce the production of virus-neutralizing antibodies. The E protein contributes to coronavirus budding. The N protein has functions associated with viral replication and pathogenesis. | ||
| status | ACTIVE | ||
Fully-Specified Name | |||
| component | Porcine epidemic diarrhea virus whole genome | ||
| property | Seq = Nucleotide Sequence | ||
| time | Pt = Point in time: To identify measures at a point in time. This is a synonym for “spot” or “random” as applied to urine measurements. | ||
| system | Isolate | ||
| scale | Nom = Nominal: Nominal or categorical responses that do not have a natural ordering. (e.g., names of bacteria, reported as answers, categories of appearance that do not have a natural ordering, such as, yellow, clear, bloody. | ||
| method | Sequencing | ||
Additional Names | |||
| short name | PEDV whole genome Islt-Seq | ||
Basic Attributes | |||
| class | MICRO | ||
| type | 1 Laboratory | ||
| order vs. observation | Both | ||
Associated Observations | |||
LOINC codes that represent optional associated observation(s) for a clinical observation or laboratory test. A LOINC term may represent a single associated observation or panel containing several associated observations. | |||
History/Usage | |||
| first released | |||
| last updated | 2.63 | ||
| last change type | ADD - added | ||
Related Names | |||
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