Human coronavirus 229E+OC43 RNA [Presence] in Nasopharynx by NAA with probe detection   77008-1

LOINC Code


LOINC code77008-1
nameHuman coronavirus 229E+OC43 RNA [Presence] in Nasopharynx by NAA with probe detection
descriptionHuman coronavirus 229E is a single-stranded, positive-sense, RNA virus species in the Alphacoronavirus genus of the subfamily Coronavirinae, in the family Coronaviridae, of the order Nidovirales. Human coronavirus OC43 is an enveloped, positive-sense, single-stranded RNA virus species in the Betacoronavirus genus, of the subfamily Coronavirinae, in the family Coronaviridae, of the order Nidovirales. [Wikipedia] This assay tests for Human coronavirus 229E and OC43 RNA but does not distinguish between them.
statusACTIVE

Fully-Specified Name

componentHuman coronavirus 229E+OC43 RNA
propertyPrThr  =  Present or threshold:  The Property PrThr stands for “Presence or Threshold”, meaning either a) the actual presence or absence of an analyte, or b) that the amount of analyte detected is over some predetermined threshold.
timePt  =  Point in time:  To identify measures at a point in time. This is a synonym for “spot” or “random” as applied to urine measurements.
systemNph  =  Naspopharynx
scaleOrd  =  Ordinal:  Ordered categorical responses, e.g., 1+, 2+, 3+; positive, negative; reactive, indeterminate, nonreactive.
methodProbe.amp.tar

Additional Names

short nameHCoV 229E+OC43 RNA Nph Ql NAA+probe

Basic Attributes

classMICRO
type1  Laboratory
order vs. observationBoth

Associated Observations

LOINC codes that represent optional associated observation(s) for a clinical observation or laboratory test. A LOINC term may represent a single associated observation or panel containing several associated observations.

Member of these Groups

LG32771-4Human coronavirus

Member of these Panels

78922-2Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with probe detection

History/Usage

first released
last updated2.63
last change typeMIN  - change to field other than name
change reasonAdded "RNA" to the Component. The Long Common Name and Shortname had RNA included but it was missing in the Component.; The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.

Related Names

3 Self-Sustaining Sequence Replication
3SR SR
Amplif
Amplification
Amplified
Corona virus
DNA NUCLEIC ACID PROBE
DNA probe
HCoV
HCoV 229E
HCoV 229E+OC43
HCoV 229E+OC43 RNA
ID
Infectious Disease
InfectiousDisease
LAT
LCR
Ligase chain reaction
Ligation-activated transcription
Microbiology
NAA+probe
NAAT
NASBA
Nasopharynx
Nucleic acid sequence based analysis
Ordinal
PCR
Point in time
Polymerase chain reaction
PR
Probe amp
Probe with ampification
Probe with target amplification
QBR
QL
Qual
Qualitative
Random
Ribonucleic acid
Screen
SDA
Strand Displacement Amplification
TMA
Transcription mediated amplification

Copyright © 2024 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © 1995-2024, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.

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