Norovirus genogroup I+II orf1-orf2 junction region [Presence] in Stool by NAA with probe detection   79388-5

LOINC Code


LOINC code79388-5
nameNorovirus genogroup I+II orf1-orf2 junction region [Presence] in Stool by NAA with probe detection
descriptionThis assay determines the presence of Norovirus genogroup I or II based on detection of the ORF1-ORF2 junction region. The assay does not distinguish between genogroup I and II. This term was created for, but is not limited in use to, Nanosphere's Verigene Enteric Pathogens Nucleic Acid Test, which is intended for the detection and identification of common pathogenic enteric bacteria, viruses, and genetic virulence markers in stool specimens from individuals with signs and symptoms of gastrointestinal infection.
statusACTIVE

Fully-Specified Name

componentNorovirus genogroup I+II orf1-orf2 junction region
propertyPrThr  =  Present or threshold:  The Property PrThr stands for “Presence or Threshold”, meaning either a) the actual presence or absence of an analyte, or b) that the amount of analyte detected is over some predetermined threshold.
timePt  =  Point in time:  To identify measures at a point in time. This is a synonym for “spot” or “random” as applied to urine measurements.
systemStool  =  Stool = Fecal
scaleOrd  =  Ordinal:  Ordered categorical responses, e.g., 1+, 2+, 3+; positive, negative; reactive, indeterminate, nonreactive.
methodProbe.amp.tar

Additional Names

short nameNorov GI+II orf1-orf2 jnc Stl Ql NAA+pr

Basic Attributes

classMICRO
type1  Laboratory
order vs. observationObservation

Associated Observations

LOINC codes that represent optional associated observation(s) for a clinical observation or laboratory test. A LOINC term may represent a single associated observation or panel containing several associated observations.

Member of these Panels

92696-4Gastrointestinal viral pathogens panel - Stool by NAA with probe detection

History/Usage

test rank4118 of 2000 most commonly performed tests by labs in USA
first released
last updated2.73
last change typeMIN  - change to field other than name
change reasonThe PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.

Related Names

2
3 Self-Sustaining Sequence Replication
3SR SR
Amplif
Amplification
Amplified
Bowel movement
DNA NUCLEIC ACID PROBE
DNA probe
Faecal
Faeces
Fecal
Feces
Human Calcivirus
ID
Infectious Disease
InfectiousDisease
LAT
LCR
Ligase chain reaction
Ligation-activated transcription
Microbiology
NAA+probe
NAAT
NASBA
Norov GI+II orf1-orf2 jnc
Norovirus 1
Norovirus G1
Norovirus GI
Norovirus GI + GII
Norovirus GI+II
Norwalk virus
Nucleic acid sequence based analysis
Ordinal
PCR
Point in time
Polymerase chain reaction
PR
Probe amp
Probe with ampification
Probe with target amplification
QBR
QL
Qual
Qualitative
Random
Screen
SDA
Stl
Stool = Fecal
Strand Displacement Amplification
TMA
Transcription mediated amplification

Copyright © 2024 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © 1995-2024, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.

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