Rotavirus A nsp5 gene [Presence] in Stool by NAA with probe detection 79389-3
LOINC Code
| LOINC code | 79389-3 | ||
|---|---|---|---|
| name | Rotavirus A nsp5 gene [Presence] in Stool by NAA with probe detection | ||
| description | This assay detects the nsp5 gene that is specific for Rotavirus A, the most common type of Rotavirus that affects humans. This term was created for, but is not limited in use to, Nanosphere's Verigene Enteric Pathogens Nucleic Acid Test, which is intended for the detection and identification of common pathogenic enteric bacteria, viruses, and genetic virulence markers in stool specimens from individuals with signs and symptoms of gastrointestinal infection. The Verigene Rotavirus test is not expected to detect Rotavirus genogroups B, D, and NADRV, or genogroup C strains with the exception of porcine strains within genogroup C. | ||
| status | ACTIVE | ||
Fully-Specified Name | |||
| component | Rotavirus A nsp5 gene | ||
| property | PrThr = Present or threshold: The Property PrThr stands for “Presence or Threshold”, meaning either a) the actual presence or absence of an analyte, or b) that the amount of analyte detected is over some predetermined threshold. | ||
| time | Pt = Point in time: To identify measures at a point in time. This is a synonym for “spot” or “random” as applied to urine measurements. | ||
| system | Stool = Stool = Fecal | ||
| scale | Ord = Ordinal: Ordered categorical responses, e.g., 1+, 2+, 3+; positive, negative; reactive, indeterminate, nonreactive. | ||
| method | Probe.amp.tar | ||
Additional Names | |||
| short name | RVA nsp5 Stl Ql NAA+probe | ||
Basic Attributes | |||
| class | MICRO | ||
| type | 1 Laboratory | ||
| order vs. observation | Observation | ||
Associated Observations | |||
LOINC codes that represent optional associated observation(s) for a clinical observation or laboratory test. A LOINC term may represent a single associated observation or panel containing several associated observations. | |||
Member of these Panels | |||
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History/Usage | |||
| test rank | 4145 of 2000 most commonly performed tests by labs in USA | ||
| first released | |||
| last updated | 2.73 | ||
| last change type | MIN - change to field other than name | ||
| change reason | The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.; Updated "RV A" to "RVA" in the Shortname for consistency across terms. | ||
Related Names | |||
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| hierarchy paths | LOINC Home {component} LP432695-7 Laboratory LP29693-6 Microbiology and Antimicrobial susceptibility LP343406-7 Microbiology LP7819-8 Microorganism LP14559-6 Virus LP14855-8 Rotavirus LP14844-2 Rotavirus A LP204843-9 Rotavirus A nsp5 gene LP200481-2 Rotavirus A nsp5 gene | Stool | Microbiology LP378990-8 LOINC Home {component} LP432695-7 Laboratory LP29693-6 Microbiology and Antimicrobial susceptibility LP343406-7 Microbiology LP7819-8 Microorganism LP14559-6 Virus LP14855-8 Viruses, non-human pathogens LP30610-7 Rotavirus LP14844-2 Rotavirus A nsp5 gene LP200481-2 Rotavirus A nsp5 gene | Stool | Microbiology LP378990-8 | ||
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