SARS-CoV-2 (COVID-19) S gene mutation detected [Identifier] in Specimen by Molecular genetics method   96751-3

LOINC Code


LOINC code96751-3
nameSARS-CoV-2 (COVID-19) S gene mutation detected [Identifier] in Specimen by Molecular genetics method
descriptionThis term is used to report the mutation(s) identified within the S (spike) gene of SARS coronavirus 2 (SARS-CoV-2) by molecular methods. For reporting the SARS-CoV-2 variant strain identified, various codes are available in LOINC depending on the nomenclature used. For the most general code (nomenclature unspecified), use SARS-CoV-2 (COVID-19) variant [Type] in Specimen [LOINC: 96741-4]. To report the lineage for the variant, use SARS-CoV-2 (COVID-19) lineage [Type] in Specimen [LOINC: 96895-8]. To report the clade for the variant, use SARS-CoV-2 (COVID-19) clade [Type] in Specimen [LOINC: 96896-6].
statusACTIVE

Fully-Specified Name

componentSARS coronavirus 2 S gene mutation detected
propertyPrid  =  Presence or identity:  Prid stands for “Presence or identity”, is used for assays that detect whether or not an analyte of a particular kind is present, and if it is, to identify the specific analyte.
timePt  =  Point in time:  To identify measures at a point in time. This is a synonym for “spot” or “random” as applied to urine measurements.
systemXXX
scaleNom  =  Nominal:  Nominal or categorical responses that do not have a natural ordering. (e.g., names of bacteria, reported as answers, categories of appearance that do not have a natural ordering, such as, yellow, clear, bloody.
methodMolgen  =  Molecular Genetics:  General class of methods used to detect genetic attributes on a molecular basis including RFL, PCR and other methods.

Additional Names

short nameSARS-CoV-2 S gene mut Spec

Basic Attributes

classMICRO
type1  Laboratory
order vs. observationBoth

Associated Observations

LOINC codes that represent optional associated observation(s) for a clinical observation or laboratory test. A LOINC term may represent a single associated observation or panel containing several associated observations.

History/Usage

first released
last updated2.74
last change typeMIN  - change to field other than name
change reasonRelease 2.74: ORDER_OBS: Updated to both an order and an observation for panel inclusion and representation as an order. ;

Related Names

2019 Novel Coronavirus
2019-nCoV
Corona virus
COVID19
COVID-19
ID
Identity or presence
II
Infectious Disease
InfectiousDisease
Microbiology
Misc
Miscellaneous
Molecular genetics
Mut
Mutations
Nominal
Other
PCR
Point in time
Random
S prime
SARS Coronavirus 1
SARS-CoV
SARS-CoV-1
SARS-CoV-2
SARS-CoV-2 S gene
SARS-CoV-2 S gene mut
SARS-Related Coronavirus
Severe Acute Respiratory Syndrome
Spec
To be specified in another part of the message
Unspecified
Viral Pneumonias
Wuhan coronavirus

Copyright © 2024 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © 1995-2024, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.

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