SARS-CoV-2 (COVID-19) S gene mutation [Presence] in Specimen by Molecular genetics method   96752-1

LOINC Code


LOINC code96752-1
nameSARS-CoV-2 (COVID-19) S gene mutation [Presence] in Specimen by Molecular genetics method
descriptionThis term is used to report whether a known mutation was detected within the S (spike) gene of SARS coronavirus 2 (SARS-CoV-2) by molecular methods. To report the mutation found, use [LOINC: 96751-3]. For reporting the SARS-CoV-2 variant strain identified, various codes are available in LOINC depending on the nomenclature used. For the most general code (nomenclature unspecified), use SARS-CoV-2 (COVID-19) variant [Type] in Specimen [LOINC: 96741-4]. To report the lineage for the variant, use SARS-CoV-2 (COVID-19) lineage [Type] in Specimen [LOINC: 96895-8]. To report the clade for the variant, use SARS-CoV-2 (COVID-19) clade [Type] in Specimen [LOINC: 96896-6].
statusACTIVE

Fully-Specified Name

componentSARS coronavirus 2 S gene mutation
propertyPrThr  =  Present or threshold:  The Property PrThr stands for “Presence or Threshold”, meaning either a) the actual presence or absence of an analyte, or b) that the amount of analyte detected is over some predetermined threshold.
timePt  =  Point in time:  To identify measures at a point in time. This is a synonym for “spot” or “random” as applied to urine measurements.
systemXXX
scaleOrd  =  Ordinal:  Ordered categorical responses, e.g., 1+, 2+, 3+; positive, negative; reactive, indeterminate, nonreactive.
methodMolgen  =  Molecular Genetics:  General class of methods used to detect genetic attributes on a molecular basis including RFL, PCR and other methods.

Additional Names

short nameSARS-CoV-2 S gene mut Spec Ql

Basic Attributes

classMICRO
type1  Laboratory
order vs. observationObservation

Associated Observations

LOINC codes that represent optional associated observation(s) for a clinical observation or laboratory test. A LOINC term may represent a single associated observation or panel containing several associated observations.

History/Usage

first released
last updated2.70
last change typeADD  - added

Related Names

2019 Novel Coronavirus
2019-nCoV
Corona virus
COVID19
COVID-19
ID
II
Infectious Disease
InfectiousDisease
Microbiology
Misc
Miscellaneous
Molecular genetics
Mut
Mutations
Ordinal
Other
PCR
Point in time
PR
QL
Qual
Qualitative
Random
S prime
SARS Coronavirus 1
SARS-CoV
SARS-CoV-1
SARS-CoV-2
SARS-CoV-2 S gene
SARS-CoV-2 S gene mut
SARS-Related Coronavirus
Screen
Severe Acute Respiratory Syndrome
Spec
To be specified in another part of the message
Unspecified
Viral Pneumonias
Wuhan coronavirus

Copyright © 2024 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © 1995-2024, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.

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