SARS-CoV-2 (COVID-19) sequencing and identification panel - Specimen by Molecular genetics method   96894-1

LOINC Code


LOINC code96894-1
nameSARS-CoV-2 (COVID-19) sequencing and identification panel - Specimen by Molecular genetics method
descriptionThis panel contains sequencing and identification results for SARS coronavirus 2 (SARS-CoV-2) detected in various specimens. Results may include the genome sequence, identified S gene mutations of known and unknown significance, and the clade [LOINC: 96896-6], lineage [LOINC: 96895-8] and other (e.g. common) variant name [LOINC: 96741-4], such as "UK variant", based on the viral genome sequence and mutations found. Currently, lineage results may be determined using the Pangolin lineage assignment application (https://cov-lineages.org/pangolin.html), and clade assignment based on either the Nextstrain application (https://clades.nextstrain.org) or GISAID (https://www.gisaid.org/).
statusACTIVE

Fully-Specified Name

componentSARS coronavirus 2 sequencing & identification panel
property-
timePt  =  Point in time:  To identify measures at a point in time. This is a synonym for “spot” or “random” as applied to urine measurements.
systemXXX
scale-
methodMolgen  =  Molecular Genetics:  General class of methods used to detect genetic attributes on a molecular basis including RFL, PCR and other methods.

Additional Names

short nameSARS-CoV-2 Seq and ID Pnl Spec

Basic Attributes

classPANEL.MICRO
type1  Laboratory
order vs. observationOrder

Associated Observations

LOINC codes that represent optional associated observation(s) for a clinical observation or laboratory test. A LOINC term may represent a single associated observation or panel containing several associated observations.

History/Usage

first released
last updated2.70
last change typeADD  - added

Related Names

2019 Novel Coronavirus
2019-nCoV
Corona virus
COVID19
COVID-19
ID
II
Infectious Disease
InfectiousDisease
Microbiology
Misc
Miscellaneous
Molecular genetics
Other
Pan
PANEL.MICROBIOLOGY
Panl
PCR
Pnl
Point in time
Random
SARS Coronavirus 1
SARS-CoV
SARS-CoV-1
SARS-CoV-2
SARS-CoV-2 Seq and ID Pnl
Severe Acute Respiratory Syndrome
Spec
To be specified in another part of the message
Unspecified
Viral Pneumonias
Wuhan coronavirus

Copyright © 2024 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © 1995-2024, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.

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