PEDV S INDEL strain S gene [Cycle Threshold #] in Specimen by NAA with probe detection 85355-6
LOINC Code
| LOINC code | 85355-6 | ||
|---|---|---|---|
| name | PEDV S INDEL strain S gene [Cycle Threshold #] in Specimen by NAA with probe detection | ||
| description | Targeted PCR-based analysis of nucleic acids within the spike (S) gene specific to the S INDEL strain of the Porcine epidemic diarrhea virus (PEDV) and reported as a cross threshold (Ct) value. This assay is performed on various specimens, including fresh tissues (intestine), fluids (feces, intestinal content, oral fluid), fecal swabs, and other miscellaneous specimens (environmental, feed, feed pre-mix). This term was created for, but not limited in use to, the submitter's PEDV S gene In-Del differential PCR, which targets the highly conserved regions of the PEDV S gene in order to differentiate between the two strains of PEDV know to be circulating in North America: the original US strain (US PEDV prototype) [LOINC: 85356-4] and the variant US strain (S INDEL variant), represented by this term. | ||
| status | ACTIVE | ||
Fully-Specified Name | |||
| component | Porcine epidemic diarrhea virus S INDEL strain S gene | ||
| property | ThreshNum = Threshold Number | ||
| time | Pt = Point in time: To identify measures at a point in time. This is a synonym for “spot” or “random” as applied to urine measurements. | ||
| system | XXX | ||
| scale | Qn = Quantitative: The result of the test is a numeric value that relates to a continuous numeric scale. Reported either as an integer, a ratio, a real number, or a range. The test result value may optionally contain a relational operator from the set {<=, <, >, >=}. Valid values for a quantitative test are of the form "7", "-7", "7.4", "-7.4", "7.8912", "0.125", "<10", "<10.15", ">12000", 1-10, 1:256 | ||
| method | Probe.amp.tar | ||
Additional Names | |||
| short name | PEDV S INDEL S gene Ct Spec Qn NAA+probe | ||
Basic Attributes | |||
| class | MICRO | ||
| type | 1 Laboratory | ||
| order vs. observation | Both | ||
| example UCUM units | {Ct_value} The Unified Code for Units of Measure (UCUM) is a code system intended to include all units of measures being contemporarily used in international science, engineering, and business (www.unitsofmeasure.org) | ||
| example unit | Ct | ||
Associated Observations | |||
LOINC codes that represent optional associated observation(s) for a clinical observation or laboratory test. A LOINC term may represent a single associated observation or panel containing several associated observations. | |||
Member of these Panels | |||
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History/Usage | |||
| first released | |||
| last updated | 2.69 | ||
| last change type | MIN - change to field other than name | ||
Related Names | |||
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Copyright © 2024 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © 1995-2024, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.
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